STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95784.1Haloacid dehalogenase-like hydrolase; KEGG: lba:Lebu_0673 1.3e-16 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025; Psort location: Cytoplasmic, score: 9.26. (241 aa)    
Predicted Functional Partners:
EHL96865.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.918
EHL95604.1
Competence/damage-inducible protein CinA domain protein; Belongs to the CinA family.
    
  0.872
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.868
EHL98024.1
Hypothetical protein; KEGG: btl:BALH_4908 1.0e-23 HAD superfamily hydrolase K01560.
  
     0.746
EHL98853.1
Hypothetical protein; KEGG: hiq:CGSHiGG_06740 7.6e-09 glpQ; glycerophosphodiester phosphodiesterase K02440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.542
EHL96709.1
Channel protein, MIP family; KEGG: ctu:Ctu_01690 2.1e-25 glpF; glycerol uptake facilitator protein K02440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.542
EHL95796.1
HAD hydrolase family; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.
  
 
 0.497
EHL98025.1
Hypothetical protein; KEGG: bce:BC5408 7.1e-25 2-haloalkanoic acid dehalogenase K01560.
  
     0.496
EHM00365.1
ComE operon protein 2; KEGG: lpj:JDM1_1785 3.8e-65 comEB; dCMP deaminase; K01493 dCMP deaminase.
  
 
  0.493
rpsB
Ribosomal protein S2; KEGG: apb:SAR116_0519 2.9e-60 ribosomal protein S2 K02967; Psort location: Cytoplasmic, score: 9.97; Belongs to the universal ribosomal protein uS2 family.
       0.467
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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