STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95797.1Hypothetical protein; KEGG: pfa:PF08_0034 0.00026 gcn5; histone acetyltransferase GCN5, putative; K06062 histone acetyltransferase. (234 aa)    
Predicted Functional Partners:
EHL95796.1
HAD hydrolase family; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.
 
  
 0.950
EHL95798.1
Ser/Thr phosphatase family protein; KEGG: ldb:Ldb1591 1.1e-108 putative 5'-nucleotidase K01081; Belongs to the 5'-nucleotidase family.
 
    0.877
EHL95795.1
TIGR01906 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.855
EHL95799.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.820
EHM01452.1
Replication initiation and membrane attachment protein, DnaB/DnaD family; KEGG: bpu:BPUM_2543 1.2e-31 dnaB; replicative DNA helicase K03346; Psort location: Cytoplasmic, score: 8.96.
  
    0.689
divIB
Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
     0.647
EHM01464.1
Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.639
EHM01451.1
Primosomal protein DnaI; Psort location: Cytoplasmic, score: 8.96.
  
     0.617
EHM00698.1
Hypothetical protein.
  
   
 0.616
ezrA
Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.607
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.