STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95577.1Phosphodiesterase family protein. (172 aa)    
Predicted Functional Partners:
EHL95578.1
Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
 
  
 0.985
murI-2
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.800
EHL95576.1
CBS domain protein.
 
     0.783
EHL95580.1
Hypothetical protein.
       0.637
EHL95359.1
Peroxiredoxin; KEGG: lbr:LVIS_0086 1.0e-78 peroxiredoxin; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C); Psort location: Cytoplasmic, score: 9.97.
   
 
 0.632
EHL95673.1
Hypothetical protein.
  
     0.561
EHL99259.1
Hypothetical protein.
  
     0.539
EHL99637.1
Hypothetical protein.
  
     0.524
EHM01471.1
Nucleic acid-binding domain protein; KEGG: sjj:SPJ_1972 3.6e-85 3'-5' exoribonuclease YhaM K03698; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.432
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.