STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95633.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
EHL95632.1
Glycerophosphodiester phosphodiesterase family protein.
       0.773
ddl
D-ala D-ala ligase protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.752
EHL95631.1
DNA-3-methyladenine glycosylase I.
       0.568
EHL95635.1
Hypothetical protein.
       0.452
EHL95636.1
Hypothetical protein.
       0.452
EHL95637.1
ABC transporter, ATP-binding protein.
       0.452
EHL95638.1
Transcriptional regulator, GntR family.
       0.452
EHL95639.1
Hypothetical protein.
       0.412
EHL95640.1
Efflux ABC transporter, permease protein.
       0.412
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.