STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95671.1Beta-lactamase. (232 aa)    
Predicted Functional Partners:
EHL95670.1
Hypothetical protein.
     0.991
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.866
EHL97875.1
Glycosyl hydrolase family 3 protein; KEGG: lcb:LCABL_07640 1.1e-83 bglB; thermostable beta-glucosidase B (gentiobiase) (cellobiase) (beta-D-glucoside glucohydrolase) K05349; Psort location: Periplasmic, score: 9.44; overlaps another CDS with the same product name.
  
 
 0.553
EHL97876.1
Glycosyl hydrolase family 3 protein; KEGG: lrh:LGG_00685 4.9e-159 bglX; beta-glucosidase (GH3); K05349 beta-glucosidase; Psort location: Periplasmic, score: 9.44; overlaps another CDS with the same product name.
  
 
 0.553
EHL95672.1
Hypothetical protein.
       0.540
EHL95673.1
Hypothetical protein.
       0.538
EHM00515.1
Beta-lactamase; KEGG: lcb:LCABL_23180 3.1e-38 pbpX1; serine-type D-Ala-D-Ala carboxypeptidase; Psort location: CytoplasmicMembrane, score: 9.97.
  
     0.487
EHM00503.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: lbr:LVIS_2055 1.5e-70 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase S11 family.
     
 0.420
EHM01479.1
Aspartate racemase; KEGG: lsl:LSL_0018 7.1e-80 racX; aspartate racemase K01779; Psort location: Cytoplasmic, score: 8.96; Belongs to the aspartate/glutamate racemases family.
  
  
 0.413
EHL99070.1
Hypothetical protein; KEGG: oih:OB3072 3.9e-24 beta-lactamase K01467.
    
 0.412
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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