STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95693.1Hypothetical protein. (77 aa)    
Predicted Functional Partners:
EHL98455.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.774
EHM00208.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.773
EHL95692.1
Hypothetical protein.
       0.705
EHL95694.1
Aldo/keto reductase family protein.
       0.678
EHL95695.1
Antibiotic biosynthesis monooxygenase.
 
     0.498
EHL95691.1
Pyridoxamine 5'-phosphate oxidase family protein.
       0.484
EHM00431.1
Isochorismatase family protein; KEGG: pfr:PFREUD_18100 7.7e-67 isochorismatase hydrolase; Psort location: Cytoplasmic, score: 8.96.
  
     0.455
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.