STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95727.1Transcriptional regulator, TetR family. (190 aa)    
Predicted Functional Partners:
EHL95728.1
Flavodoxin-like protein.
 
     0.921
EHL95725.1
Hypothetical protein.
 
     0.673
EHL95726.1
Hypothetical protein.
       0.639
EHM01273.1
CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.537
EHL96111.1
CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.454
EHL95290.1
CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.452
EHM01086.1
Flavodoxin-like protein; KEGG: lci:LCK_00777 2.2e-53 putative NADPH-quinone reductase (modulator of drug activity B).
 
     0.443
EHL95181.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.409
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.