STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95732.1Hypothetical protein. (111 aa)    
Predicted Functional Partners:
EHM00625.1
PspC domain protein; KEGG: bla:BLA_0408 0.0017 possible histidine kinase sensor of two component system; Psort location: CytoplasmicMembrane, score: 9.82.
 
    0.648
EHL95635.1
Hypothetical protein.
  
     0.515
EHM01093.1
ABC-2 type transporter; KEGG: lpj:JDM1_1639 6.2e-08 hpk6; histidine protein kinase; sensor protein; K07778 two-component system, NarL family, sensor histidine kinase DesK; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.471
EHL97980.1
Hypothetical protein.
  
    0.468
EHL97637.1
Toxin-antitoxin system, toxin component, RelE domain protein.
  
     0.448
EHL95794.1
PspC domain protein; KEGG: bla:BLA_0408 0.0035 possible histidine kinase sensor of two component system; Psort location: CytoplasmicMembrane, score: 9.82.
  
    0.446
EHM00624.1
Hypothetical protein; KEGG: lki:LKI_08340 8.0e-17 HPr kinase/phosphorylase K08972; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.443
EHM01101.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
   
    0.420
EHL99259.1
Hypothetical protein.
  
     0.417
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.