STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95417.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (163 aa)    
Predicted Functional Partners:
EHL95418.1
Hypothetical protein; KEGG: ccv:CCV52592_1824 3.5e-06 phosphoglycerate kinase; Psort location: CytoplasmicMembrane, score: 9.46.
  
 0.988
EHL95347.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.865
EHL95419.1
FeoA domain protein.
       0.666
EHL95420.1
Iron dependent repressor, DNA binding domain protein; KEGG: apb:SAR116_1403 1.4e-05 conserved protein, winged helix domain protein K11924; Psort location: Cytoplasmic, score: 9.97.
       0.637
EHL95421.1
Putative cadmium, cobalt and zinc/H(+)-K(+) antiporter; KEGG: eci:UTI89_C0749 5.4e-43 zinc transporter ZitB K03295; Psort location: CytoplasmicMembrane, score: 10.00.
       0.546
EHL95414.1
Hypothetical protein.
 
     0.533
EHL95415.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.470
EHL95416.1
Transcriptional regulator, PadR family.
       0.470
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.