STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95337.1Putative succinylornithine transaminase; KEGG: lfe:LAF_0723 3.7e-122 argD; acetylornithine aminotransferase; K00818 acetylornithine aminotransferase; Psort location: Cytoplasmic, score: 9.97. (388 aa)    
Predicted Functional Partners:
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
 
 0.999
argJ
Glutamate N-acetyltransferase/amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
 
 
 0.999
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
 
 0.999
EHL99739.1
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain protein; KEGG: lbr:LVIS_2026 1.1e-72 ornithine carbamoyltransferase K00611; Psort location: Cytoplasmic, score: 9.97.
 
 0.939
dapH
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.
    
 0.912
argG
KEGG: lpj:JDM1_0642 8.6e-155 argG; argininosuccinate synthase; K01940 argininosuccinate synthase; Psort location: Cytoplasmic, score: 9.26; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
 
 0.901
EHL98044.1
Peptidase dimerization domain protein; KEGG: lpl:lp_2855 1.8e-67 dapE2; succinyl-diaminopimelate desuccinylase K01439; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.893
EHL99052.1
KEGG: lpl:lp_1321 2.2e-149 pepV; dipeptidase PepV K01274; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.884
EHL99738.1
Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain protein; KEGG: lbr:LVIS_2026 1.6e-73 ornithine carbamoyltransferase K00611; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.882
EHM00146.1
Peptidase, ArgE/DapE family; KEGG: lrf:LAR_0181 5.4e-114 succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.860
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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