STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95351.1Hypothetical protein; Psort location: Extracellular, score: 9.65. (300 aa)    
Predicted Functional Partners:
EHL95604.1
Competence/damage-inducible protein CinA domain protein; Belongs to the CinA family.
     
 0.859
EHL95350.1
Hypothetical protein; KEGG: afw:Anae109_3812 1.1e-08 dimethyladenosine transferase; K02528 dimethyladenosine transferase; Psort location: Extracellular, score: 8.44.
       0.773
EHL95353.1
Hypothetical protein; KEGG: ddi:DDB_G0271052 0.0076 CHR group protein; K11647 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4; Psort location: Extracellular, score: 9.64.
  
 0.693
EHL96296.1
Phage major capsid protein, HK97 family; KEGG: bao:BAMF_3086 3.4e-14 seryl-tRNA synthetase seryl-tRNA(Ser/sec) synthetase; serine-tRNA ligase; SerRS.
   
   0.618
EHL96294.1
Phage portal protein, HK97 family; Psort location: Extracellular, score: 9.64.
   
   0.616
EHL97214.1
Peptidase, C39 family; KEGG: spx:SPG_0480 2.1e-25 blpA; ABC transporter ATP-binding protein BlpA; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 0.551
EHL99855.1
Hypothetical protein.
   
 
 0.542
EHM00364.1
KEGG: apb:SAR116_0501 2.2e-05 possible DNA uptake protein, ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.524
EHL95352.1
Hypothetical protein.
       0.520
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
 0.471
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.