STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95355.1Hypothetical protein; KEGG: lsl:LSL_0044 7.8e-42 oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.96. (227 aa)    
Predicted Functional Partners:
EHL95354.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.572
EHL97375.1
Hypothetical protein.
   
    0.535
EHL95356.1
KEGG: bmq:BMQ_1342 2.2e-23 Cof-like hydrolase K07024; Psort location: Cytoplasmic, score: 8.96.
       0.528
EHL98211.1
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
   
    0.497
lacD
KEGG: str:Sterm_3960 1.3e-78 tagatose-bisphosphate aldolase K01635; Belongs to the aldolase LacD family.
   
    0.497
EHM01485.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
    0.479
EHL97383.1
KEGG: lsl:LSL_0916 8.5e-45 hsdS; type I restriction-modification system specificity subunit; K01154 type I restriction enzyme, S subunit.
   
    0.479
EHL95353.1
Hypothetical protein; KEGG: ddi:DDB_G0271052 0.0076 CHR group protein; K11647 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4; Psort location: Extracellular, score: 9.64.
       0.418
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.