STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95295.1CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00. (427 aa)    
Predicted Functional Partners:
EHL95296.1
DNA-binding helix-turn-helix protein; KEGG: cja:CJA_3717 0.0037 dam; adenine-specific DNA methyltransferase.
       0.776
EHL95294.1
Hypothetical protein.
       0.741
EHL95297.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.741
EHM00437.1
Glycosyl hydrolase family 25; KEGG: lpl:lp_3093 2.5e-32 muramidase (putative) K01185.
    
   0.595
EHL96522.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: ebi:EbC_39640 1.5e-14 rpeA; IgA1 protease precursor; K12684 serine protease autotransporter.
  
     0.587
EHL97570.1
Hypothetical protein; Psort location: Extracellular, score: 9.52.
  
     0.551
EHL98744.1
Hypothetical protein; KEGG: lpl:lp_3093 0.00027 muramidase (putative) K01185.
  
     0.495
EHL95293.1
Hypothetical protein.
       0.487
EHL96118.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.480
EHL96545.1
Phage tail tape measure protein, TP901 family; KEGG: bsu:BSU21350 0.0064 yomI; SPbeta phage protein; lytic transglycosylase; Psort location: OuterMembrane, score: 9.49.
  
     0.464
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.