STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95271.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (241 aa)    
Predicted Functional Partners:
EHL95273.1
Transcriptional regulator, MerR family.
 
  
 0.937
EHL95272.1
Drug resistance MFS transporter, drug:H+ antiporter-2 family; KEGG: rcp:RCAP_rcc03385 8.1e-40 emrB; multidrug resistance protein B K03446; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the major facilitator superfamily.
 
    0.865
EHM00264.1
Hypothetical protein; KEGG: rpc:RPC_2239 0.0094 DNA topoisomerase I K03168.
  
    0.770
EHM00940.1
Hypothetical protein.
  
     0.520
EHM00939.1
Hypothetical protein.
  
     0.512
EHL99533.1
Hypothetical protein.
  
     0.491
EHL99117.1
Transcriptional regulator, MerR family.
 
    0.483
EHL95270.1
KEGG: lbr:LVIS_0679 2.9e-99 exonuclease III; K01142 exodeoxyribonuclease III; Psort location: Cytoplasmic, score: 9.97.
       0.481
EHM00492.1
Hypothetical protein; KEGG: lki:LKI_01315 1.2e-20 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase.
  
     0.453
EHL95799.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.405
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.