STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95105.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (267 aa)    
Predicted Functional Partners:
EHL95106.1
Putative lipid A export ATP-binding/permease protein MsbA; KEGG: lgs:LEGAS_1253 3.0e-168 ABC transporter ATP-binding protein MsbA family protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00.
       0.436
EHL98038.1
Hypothetical protein.
  
     0.417
EHL98603.1
KEGG: llk:LLKF_0731 3.1e-95 yhcA; ABC transporter ATP-binding protein/permease; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.414
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
Server load: low (14%) [HD]