STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95131.1Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: bgl:bglu_1g28200 8.7e-13 ABC-type cobalamin/Fe3 -siderophores transport systems ATPase component; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (343 aa)    
Predicted Functional Partners:
EHL95130.1
KEGG: lpj:JDM1_1231 9.7e-76 fecE; iron chelatin ABC transporter, ATP-binding protein; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.98.
 0.997
EHL98609.1
ABC transporter, ATP-binding protein; KEGG: pct:PC1_0971 7.0e-34 fecE; iron-dicitrate transporter ATP-binding subunit; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 0.971
EHL95129.1
Periplasmic binding protein.
 
 0.960
EHL97649.1
Heme ABC transporter, heme-binding protein isdE.
 
 0.909
EHL98610.1
Hypothetical protein; KEGG: kva:Kvar_3762 2.4e-10 ABC transporter related protein; K02013 iron complex transport system ATP-binding protein.
  
 0.873
EHL97651.1
ABC transporter, ATP-binding protein; KEGG: lbr:LVIS_0701 1.2e-61 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.82.
    0.870
EHL98605.1
Periplasmic binding protein; KEGG: bao:BAMF_3696 1.0e-11 RBAM_035840; iron compound ABC transporter, substrate-binding protein FeuA; Psort location: CytoplasmicMembrane, score: 9.97.
 
 0.829
EHL99279.1
Hypothetical protein.
  
 0.789
EHL98535.1
Fibro-slime domain protein; KEGG: sce:YIR019C 1.4e-14 MUC1, FLO11, STA4; GPI-anchored cell surface glycoprotein (flocculin) required for pseudohyphal formation, invasive growth, flocculation, and biofilms; transcriptionally regulated by the MAPK pathway (via Ste12p and Tec1p) and the cAMP pathway (via Flo8p); K01178 glucoamylase.
  
 0.789
EHL95132.1
Putative flavodoxin; KEGG: bal:BACI_c34850 7.2e-16 flavodoxin.
  
    0.788
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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