STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95137.1Hypothetical protein; KEGG: mpl:Mpal_1220 5.1e-15 serine O-acetyltransferase K00640. (109 aa)    
Predicted Functional Partners:
EHL95138.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.788
EHL95136.1
Transporter, major facilitator family protein; KEGG: bmq:BMQ_0779 2.7e-87 narK; nitrite extrusion protein K02575; Psort location: CytoplasmicMembrane, score: 10.00.
       0.555
EHL99758.1
SUF system FeS assembly protein, NifU family; KEGG: apb:SAR116_0470 1.3e-07 NifU-like protein involved in Fe-S cluster formation K04488.
  
    0.549
EHL95127.1
SUF system FeS assembly protein, NifU family; KEGG: apb:SAR116_0470 0.00013 NifU-like protein involved in Fe-S cluster formation K04488.
  
    0.549
EHL95135.1
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
       0.542
EHL95123.1
KEGG: llk:LLKF_1966 2.3e-97 sufC; SUF system FeS cluster assembly protein ATP-dependent transporter SufC K09013; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.492
EHL99761.1
KEGG: llk:LLKF_1966 7.8e-90 sufC; SUF system FeS cluster assembly protein ATP-dependent transporter SufC K09013; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.489
EHL95160.1
Hypothetical protein; KEGG: vfm:VFMJ11_A0762 1.7e-16 esterase YdiI.
  
 
 0.461
EHL95134.1
KEGG: apb:SAR116_2207 0.0029 molybdopterin converting factor, small subunit K03636.
       0.409
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.