STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95154.1KEGG: lpj:JDM1_1254 6.4e-269 narH; nitrate reductase, beta chain; K00371 nitrate reductase 1, beta subunit. (519 aa)    
Predicted Functional Partners:
EHL95153.1
KEGG: lpj:JDM1_1253 0. narG; nitrate reductase, alpha chain; K00370 nitrate reductase 1, alpha subunit; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 0.999
EHL95156.1
KEGG: lpl:lp_1500 4.0e-70 narI; nitrate reductase, gamma chain K00374; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.996
EHL95157.1
Hypothetical protein; KEGG: lrf:LAR_0936 4.8e-19 nitrate reductase gamma subunit; K00374 nitrate reductase 1, gamma subunit; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.992
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.981
EHL95136.1
Transporter, major facilitator family protein; KEGG: bmq:BMQ_0779 2.7e-87 narK; nitrite extrusion protein K02575; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.977
EHL95155.1
Nitrate reductase molybdenum cofactor assembly chaperone; KEGG: lpl:lp_1499 3.9e-63 narJ; nitrate reductase, delta chain K00373; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.962
EHL96875.1
Flavin reductase; KEGG: llk:LLKF_0422 4.8e-26 ydhB; NADPH-dependent FMN reductase; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.897
EHL95372.1
Flavin reductase; KEGG: lpj:JDM1_2783 2.0e-210 fumarate reductase, flavoprotein subunit precursor; K00244 fumarate reductase flavoprotein subunit.
  
 
 0.897
EHL95305.1
FMN-binding domain protein; KEGG: lpj:JDM1_2783 1.6e-80 fumarate reductase, flavoprotein subunit precursor; K00244 fumarate reductase flavoprotein subunit.
  
 
 0.897
EHM00165.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: btk:BT9727_0684 7.1e-112 ndh; NADH dehydrogenase K00356; Psort location: Cytoplasmic, score: 9.97.
    
 0.869
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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