STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95165.1Cadmium-exporting ATPase; KEGG: lbr:LVIS_0392 5.1e-205 cation transport ATPase; K01552; Psort location: CytoplasmicMembrane, score: 10.00. (615 aa)    
Predicted Functional Partners:
EHL95212.1
Hypothetical protein; KEGG: syp:SYNPCC7002_A2318 0.00084 pacS; cation-transporting ATPase; K01533 Cu2+-exporting ATPase.
  
 
 0.881
EHL99318.1
Hypothetical protein; KEGG: sgo:SGO_0290 2.3e-28 copper -translocating P-type ATPase.
    0.614
EHL96876.1
Transcriptional regulator, ArsR family; KEGG: xca:xccb100_2759 1.1e-06 putative methyltransferase K03892; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.557
EHL95167.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: lpl:lp_0137 1.8e-120 oxidoreductase K00540; Psort location: Cytoplasmic, score: 9.26.
       0.465
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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