STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95174.1YhgE/Pip domain protein; Psort location: CytoplasmicMembrane, score: 9.82. (268 aa)    
Predicted Functional Partners:
EHL95173.1
YhgE/Pip domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
     0.994
EHL97702.1
YhgE/Pip domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.976
EHL97891.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.971
EHL95176.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
 
     0.863
EHL95175.1
YhgE/Pip domain protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
    
0.584
EHL95172.1
Hypothetical protein; KEGG: lbr:LVIS_1825 1.7e-12 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6).
       0.551
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.