STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95181.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (142 aa)    
Predicted Functional Partners:
EHL95182.1
DNA-binding helix-turn-helix protein.
 
    0.912
EHL95180.1
Hypothetical protein; KEGG: lcb:LCABL_17450 2.3e-67 adh; bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase (NADPH:quinone reductase).
       0.785
EHL95179.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.752
EHM01273.1
CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.708
EHL97065.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.670
EHL97064.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.626
EHL96111.1
CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.573
EHM00517.1
Hypothetical protein; KEGG: lci:LCK_01077 0.00013 parvulin-like peptidyl-prolyl isomerase; K07533 foldase protein PrsA; Psort location: Extracellular, score: 9.64.
  
     0.446
EHL99328.1
Ser/Thr phosphatase family protein; KEGG: lpl:lp_3251 3.4e-57 3',5'-cyclic-nucleotide phosphodiesterase K01120; Psort location: Cytoplasmic, score: 9.97.
  
     0.439
EHM00181.1
Transcriptional activator, Rgg/GadR/MutR family domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.425
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.