STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95200.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (185 aa)    
Predicted Functional Partners:
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
 
 0.904
EHL95934.1
Pyruvate kinase; KEGG: lbr:LVIS_0765 7.0e-263 pyruvate kinase; K00873 pyruvate kinase; Psort location: Cytoplasmic, score: 9.97.
   
 
  0.869
EHL96076.1
KEGG: lpl:lp_1618 2.0e-61 pppL; serine/threonine specific protein phosphatase (putative) K01090.
  
 0.792
EHL95201.1
Hypothetical protein.
       0.623
EHL95212.1
Hypothetical protein; KEGG: syp:SYNPCC7002_A2318 0.00084 pacS; cation-transporting ATPase; K01533 Cu2+-exporting ATPase.
 
   0.592
EHL95213.1
Hypothetical protein; KEGG: lsl:LSL_1781 8.0e-17 dps; non-specific DNA-binding protein / iron-binding ferritin-like antioxidant protein / ferroxidase K04047; Belongs to the Dps family.
 
    0.592
EHL95199.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96.
   
   0.581
EHM00757.1
Hypothetical protein; KEGG: lre:Lreu_0587 4.7e-22 peptidoglycan glycosyltransferase K08724; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.580
EHL95198.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.539
EHL99556.1
Sigma-70 region 2; KEGG: csc:Csac_1370 1.2e-11 RNA polymerase factor sigma-70 K03091; Psort location: Cytoplasmic, score: 8.96.
 
 
 
 0.488
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.