STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95203.1KEGG: apb:SAR116_0757 0.0019 universal stress protein family protein; Psort location: Cytoplasmic, score: 8.96. (149 aa)    
Predicted Functional Partners:
EHL95202.1
Metal ion transporter, metal ion transporter family; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.684
EHL99271.1
Hypothetical protein; KEGG: mpu:MYPU_1770 1.2e-24 cysS; cysteinyl-tRNA synthetase (cysteine--tRNA ligase) K01883; Psort location: Cytoplasmic, score: 9.97; Belongs to the UPF0374 family.
  
     0.570
EHL95204.1
Transporter, major facilitator family protein; KEGG: fgr:FG00711.1 3.9e-24 hypothetical protein; K10866 DNA repair protein RAD50; Psort location: CytoplasmicMembrane, score: 10.00.
       0.535
EHL99053.1
Universal stress family protein.
  
     0.531
EHM00166.1
KEGG: apb:SAR116_0757 0.0085 universal stress protein family protein; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.501
EHL99223.1
CamS sex pheromone family protein; Psort location: OuterMembrane, score: 9.49.
  
     0.473
EHL99287.1
KEGG: lmh:LMHCC_1695 9.6e-179 glycerol phosphate lipoteichoic acid synthase 1 (LTAsynthase 1) (Polyglycerol phosphate synthase 1); Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.425
EHL95803.1
Hypothetical protein; KEGG: lbr:LVIS_1191 1.9e-86 adenine-specific DNA methylase; K00571 site-specific DNA-methyltransferase (adenine-specific).
  
     0.412
EHL95910.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.405
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.