STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95209.1KEGG: apb:SAR116_0035 2.4e-63 ammonium transporter K03320; Psort location: CytoplasmicMembrane, score: 10.00. (393 aa)    
Predicted Functional Partners:
EHL95208.1
Hypothetical protein.
     0.965
EHL99763.1
Putative glutamate synthase [NADPH], large subunit; KEGG: lca:LSEI_2556 0. glutamate synthase domain-containing 3; K00265 glutamate synthase (NADPH/NADH) large chain; Psort location: Cytoplasmic, score: 9.26.
 
  
 0.854
EHL95724.1
Putative aspartate ammonia-lyase.
   
  
 0.660
EHL95210.1
NAD dependent epimerase/dehydratase family protein; KEGG: lsl:LSL_1172 1.5e-40 oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.96.
     
 0.490
EHL95192.1
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.482
EHL99641.1
KEGG: lbr:LVIS_0990 9.6e-211 glutamine synthetase; K01915 glutamine synthetase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.456
EHL99764.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: lcz:LCAZH_2518 3.8e-232 NADPH-dependent glutamate synthase beta chain-like oxidoreductase; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.408
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.