STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nnrEYjeF-like protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. (215 aa)    
Predicted Functional Partners:
EHO53964.1
KEGG: lbr:LVIS_1439 5.5e-57 NUDIX family hydrolase; K01515 ADP-ribose pyrophosphatase; Psort location: Cytoplasmic, score: 8.96.
  
 0.994
EHO49755.1
Hydrolase, NUDIX family; KEGG: lpj:JDM1_2216 4.3e-41 ADP-ribose pyrophosphatase; K01515 ADP-ribose pyrophosphatase; Psort location: Cytoplasmic, score: 9.97; Belongs to the Nudix hydrolase family.
  
 0.994
nnrD
YjeF domain protein; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.
  
 0.980
EHO50834.1
DEAD/DEAH box helicase; KEGG: ljf:FI9785_665 8.6e-68 ATP-dependent RNA helicase; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family.
   
 0.914
cshA
DEAD-box ATP-dependent RNA helicase CshA; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.
   
 0.914
cshB
Putative DEAD-box ATP-dependent RNA helicase CshB; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures.
   
 0.914
EHO54499.1
Putative D-Ala-D-Ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. Belongs to the peptidase M15D family.
       0.701
EHO54498.1
Hypothetical protein.
       0.650
EHO50183.1
KEGG: lfe:LAF_0938 5.4e-43 pyridoxal kinase; K00868 pyridoxine kinase.
     
 0.572
EHO54497.1
Hypothetical protein; KEGG: jde:Jden_2537 0.0030 Orn/DAP/Arg decarboxylase 2; K01586 diaminopimelate decarboxylase; Psort location: OuterMembrane, score: 9.49.
       0.569
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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