STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO54508.1DNA primase/polymerase. (259 aa)    
Predicted Functional Partners:
EHO54509.1
Phage/plasmid primase, P4 family domain protein; KEGG: sso:SSO0140 4.1e-15 primase (carboxy-end fragment) K06919; Psort location: Cytoplasmic, score: 8.96.
 
     0.893
EHO54514.1
KEGG: bao:BAMF_0845 6.2e-10 p27; P27 family phage terminase small subunit.
 
     0.797
EHO54518.1
Phage prohead protease, HK97 family; KEGG: bao:BAMF_3086 6.3e-40 seryl-tRNA synthetase seryl-tRNA(Ser/sec) synthetase; serine-tRNA ligase; SerRS; Psort location: Extracellular, score: 9.64.
 
     0.775
EHO54507.1
Hypothetical protein.
       0.773
EHO54517.1
Phage portal protein, HK97 family.
 
     0.767
EHO54513.1
HNH endonuclease domain protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.753
EHO54515.1
Putative phage terminase, large subunit; Psort location: Cytoplasmic, score: 8.96.
 
     0.753
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
   
  
 0.730
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
  
  
 0.606
EHO50814.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.606
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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