STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO54519.1DNA packaging protein, QLRG family. (90 aa)    
Predicted Functional Partners:
EHO54517.1
Phage portal protein, HK97 family.
  
   0.909
EHO54518.1
Phage prohead protease, HK97 family; KEGG: bao:BAMF_3086 6.3e-40 seryl-tRNA synthetase seryl-tRNA(Ser/sec) synthetase; serine-tRNA ligase; SerRS; Psort location: Extracellular, score: 9.64.
  
   0.882
EHO50656.1
Phage minor structural protein.
  
 
 0.838
EHO50659.1
Phage tail component protein.
  
   0.830
EHO50670.1
Phage portal protein, HK97 family; Psort location: Extracellular, score: 9.64.
  
   0.792
EHO54082.1
GDSL-like protein; KEGG: lbr:LVIS_1825 2.7e-05 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6).
  
 0.758
EHO51064.1
GDSL-like protein; KEGG: bmq:BMQ_4053 5.3e-25 GDSL-like lipase/acylhydrolase.
  
 0.758
EHO49137.1
Hypothetical protein; KEGG: lbr:LVIS_1825 0.0045 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6).
  
 0.758
EHO50668.1
Phage major capsid protein, HK97 family; KEGG: bao:BAMF_3086 3.0e-15 seryl-tRNA synthetase seryl-tRNA(Ser/sec) synthetase; serine-tRNA ligase; SerRS.
  
   0.728
EHO51506.1
6-phospho-beta-glucosidase; KEGG: efa:EF0291 8.5e-171 celA; 6-phospho-beta-glucosidase K01223; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycosyl hydrolase 1 family.
   
   0.711
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.