STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO54538.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (291 aa)    
Predicted Functional Partners:
EHO45748.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
     0.797
EHO54537.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.718
EHO52632.1
Hypothetical protein; KEGG: pfr:PFREUD_18110 7.1e-80 pf1655; carboxylic ester hydrolase.
 
     0.682
EHO53467.1
Hypothetical protein; KEGG: bde:BDP_1848 7.9e-06 glycosyl transferase, family 2.
 
    0.640
EHO51874.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.601
EHO45749.1
Hypothetical protein.
 
     0.565
EHO54536.1
SNARE-like domain protein; KEGG: pmg:P9301_18161 1.3e-14 dedA; DedA family alkaline phosphatase-like protein K01077; Psort location: CytoplasmicMembrane, score: 10.00.
       0.545
EHO53814.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lca:LSEI_0712 1.1e-99 signal transduction histidine kinase; K00936; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.541
EHO54539.1
Putative penicillin amidase; KEGG: lpl:lp_3362 2.3e-97 bsh3; choloylglycine hydrolase K01442.
       0.510
EHO50112.1
Hypothetical protein; KEGG: rbe:RBE_0498 0.00027 rimJ; ribosomal-protein-alanine acetyltransferase K03790.
  
     0.484
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.