STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO54205.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (114 aa)    
Predicted Functional Partners:
EHO54204.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
      0.972
EHO53421.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.775
EHO48004.1
Hypothetical protein; KEGG: edi:EDI_201440 5.8e-11 villin; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.772
EHO46621.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.772
EHO54206.1
KEGG: sds:SDEG_0016 3.6e-92 amino acid permease K03294; Psort location: CytoplasmicMembrane, score: 10.00.
       0.492
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.