STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO54107.1Hypothetical protein; KEGG: ljo:LJ1840 6.1e-08 cell wall-associated serine proteinase; K01361 lactocepin; Psort location: Extracellular, score: 9.64; overlaps another CDS with the same product name. (443 aa)    
Predicted Functional Partners:
EHO48493.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 5.3e-16 fadD; long-chain-fatty-acid--CoA ligase K03743; Belongs to the CinA family.
    
  0.899
scpA
ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.881
EHO54106.1
Hypothetical protein; KEGG: bah:BAMEG_5478 2.5e-06 putative cell wall endopeptidase, NlpC/P60 family; Psort location: Extracellular, score: 9.64; overlaps another CDS with the same product name.
 
     0.804
EHO45333.1
Hypothetical protein.
  
     0.770
EHO49403.1
Hypothetical protein.
  
     0.769
EHO53164.1
Putative S-layer protein; KEGG: lfe:LAF_1820 4.5e-05 hypothetical protein; K01185 lysozyme.
  
     0.765
EHO54105.1
Hypothetical protein.
       0.762
EHO52221.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.755
EHO51636.1
KEGG: lbr:LVIS_1759 1.1e-99 guaA; GMP synthase K01951; Psort location: Cytoplasmic, score: 9.26; overlaps another CDS with the same product name.
   
 
  0.748
EHO51637.1
KEGG: ppe:PEPE_0412 4.1e-123 guaA; GMP synthase K01951; Psort location: Cytoplasmic, score: 9.97; overlaps another CDS with the same product name.
   
 
  0.748
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.