STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO54012.1PDZ domain protein; KEGG: lpl:lp_2132 1.4e-99 lon; endopeptidase La (putative) K07177. (319 aa)    
Predicted Functional Partners:
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
 
  
 0.915
EHO54013.1
comEA protein; KEGG: hor:Hore_06940 3.1e-08 glycogen/starch synthase, ADP-glucose type K00703; Psort location: CytoplasmicMembrane, score: 9.82.
      0.895
EHO54010.1
RNA methyltransferase, RsmD family; KEGG: lsl:LSL_0660 3.5e-46 methyltransferase K00599.
       0.734
EHO54015.1
KEGG: apb:SAR116_0501 1.7e-07 possible DNA uptake protein, ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.731
EHO54016.1
KEGG: lpl:lp_2128 6.1e-90 holA; DNA polymerase III subunit delta K02340; Psort location: Cytoplasmic, score: 8.96.
       0.683
EHO54014.1
KEGG: lpl:lp_2130 6.9e-66 comEB; dCMP deaminase K01493.
       0.643
EHO54008.1
KEGG: kfl:Kfla_2886 1.7e-46 cell division protein FtsW; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
       0.628
EHO54007.1
KEGG: pmf:P9303_16761 3.5e-119 typA; tyrosine binding protein K06207; Psort location: Cytoplasmic, score: 9.97.
       0.558
EHO46605.1
Putative glycerol phosphate lipoteichoic acid synthase 1; KEGG: sds:SDEG_0773 5.8e-172 phosphoglycerol transferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.553
EHO54009.1
Hypothetical protein.
       0.509
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.