STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO53292.1Putative glycine betaine-binding protein; KEGG: lsg:lse_0917 8.6e-107 gbuC; glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding protein K02002. (301 aa)    
Predicted Functional Partners:
EHO53293.1
KEGG: lmf:LMOf2365_1036 4.1e-116 glycine betaine/L-proline ABC transporter, permease protein K02001; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
EHO53294.1
KEGG: lsa:LSA1696 4.6e-156 putative glycine/betaine/carnitine ABC transporter, ATP-binding subunit; K02000 glycine betaine/proline transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.999
EHO49546.1
ABC transporter, substrate-binding protein, QAT family; KEGG: lsg:lse_1341 4.6e-140 bilEB; glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein K05845:K05846; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.885
EHO53863.1
KEGG: npu:Npun_F6325 9.1e-64 polar amino acid ABC transporter, inner membrane subunit K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.485
EHO53716.1
ABC transporter, permease protein; KEGG: llm:llmg_1942 3.9e-159 glnP; glutamine ABC transporter permease and substrate binding protein K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.485
potA
Putative spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
    
 0.484
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
       0.469
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
       0.441
EHO50526.1
KEGG: lpj:JDM1_2180 7.7e-35 purN; phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1; Psort location: Cytoplasmic, score: 9.97.
   
    0.433
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
       0.410
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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