STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO53185.1Hypothetical protein. (305 aa)    
Predicted Functional Partners:
EHO53184.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.908
EHO53183.1
Transcriptional regulator, PadR family.
       0.809
EHO49792.1
Hypothetical protein; KEGG: btk:BT9727_2180 0.00023 acetyltransferase K00680.
    
   0.701
EHO49403.1
Hypothetical protein.
  
     0.676
EHO52805.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.670
EHO49145.1
MucBP domain protein; KEGG: lsg:lse_0252 2.2e-05 leucine rich repeat domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.668
EHO53210.1
Hypothetical protein.
 
     0.661
EHO54273.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.645
EHO50579.1
Glycosyl hydrolase family 25; KEGG: btk:BT9727_2564 1.8e-19 ampD; N-acetylmuramoyl-L-alanine amidase K01447; Psort location: Extracellular, score: 9.64.
  
     0.613
EHO54268.1
Hypothetical protein; Psort location: Extracellular, score: 9.65.
  
     0.612
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.