STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO53137.1Glycosyl hydrolase, family 31; KEGG: ecm:EcSMS35_0019 6.5e-102 glycosy hydrolase family protein K01811; Psort location: Periplasmic, score: 9.83; Belongs to the glycosyl hydrolase 31 family. (354 aa)    
Predicted Functional Partners:
EHO53136.1
Hypothetical protein; KEGG: ecm:EcSMS35_0019 1.3e-78 glycosy hydrolase family protein K01811; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 31 family.
     0.991
EHO54198.1
Hypothetical protein; KEGG: lbr:LVIS_0137 3.9e-88 alpha-glucosidase; K01187 alpha-glucosidase.
 
     0.886
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
   
   0.665
EHO52398.1
Hypothetical protein; KEGG: bde:BDP_2092 2.9e-83 alpha-galactosidase.
  
  
  0.574
EHO51506.1
6-phospho-beta-glucosidase; KEGG: efa:EF0291 8.5e-171 celA; 6-phospho-beta-glucosidase K01223; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycosyl hydrolase 1 family.
  
 0.565
rpsI
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
   0.556
rplQ
Ribosomal protein L17.
    
   0.556
rpmJ
Ribosomal protein L36; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL36 family.
    
   0.556
rplS
Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
    
   0.556
rpsP
Ribosomal protein S16; KEGG: apb:SAR116_1817 1.3e-18 ribosomal protein S16 K02959; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bS16 family.
    
   0.556
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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