STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO53082.1Hypothetical protein; KEGG: bcm:Bcenmc03_6977 0.0039 NAD(P)H dehydrogenase (quinone); K01118 FMN-dependent NADH-azoreductase. (177 aa)    
Predicted Functional Partners:
EHO53083.1
Hypothetical protein.
 
    
0.666
EHO52083.1
Cupin domain protein; KEGG: pfr:PFREUD_19900 7.9e-26 pcaC2; 4-carboxymuconolactone decarboxylase.
 
     0.601
EHO53084.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.543
EHO49474.1
O-acetylserine dependent cystathionine beta-synthase; KEGG: lrl:pLC705_00039 1.8e-129 cysK; cysteine synthase (beta-pyrazolylalanine synthase) (beta-PA/CSase) (L-mimosine synthase) (O-acetylserine sulfhydrylase) (CSase) (OAS-TL); K01738 cysteine synthase A; Psort location: Cytoplasmic, score: 9.26.
   
 
  0.463
EHO49554.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: lpl:lp_1069 8.7e-130 ndh2; NADH dehydrogenase K03885; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.408
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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