STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO53039.1Glucuronate isomerase; KEGG: lsa:LSA0129 2.1e-183 uxaC; glucuronate isomerase K01812; Psort location: Cytoplasmic, score: 8.96. (406 aa)    
Predicted Functional Partners:
EHO53038.1
Hypothetical protein; KEGG: lsa:LSA0129 1.3e-18 uxaC; glucuronate isomerase K01812.
     0.957
EHO54150.1
Mannitol dehydrogenase domain protein; KEGG: lbr:LVIS_0139 5.5e-192 fructuronate reductase; K00040 fructuronate reductase; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.939
EHO52633.1
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.929
EHO53036.1
Hypothetical protein.
 
  
  0.832
EHO53037.1
Hypothetical protein.
    
  0.796
EHO52622.1
Kinase, PfkB family; KEGG: lsa:LSA0291 1.4e-90 kdgK; 2-dehydro-3-deoxygluconokinase K00874.
 
   
 0.588
EHO53035.1
Transporter, major facilitator family protein; KEGG: eci:UTI89_C4210 1.7e-46 yicJ; putative transporter K03292; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.576
EHO53469.1
KEGG: lgs:LEGAS_1792 3.2e-100 ulaF; L-ribulose-5-phosphate 4-epimerase; K01786 L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 8.96.
     
 0.557
EHO52574.1
Alpha-L-arabinofuranosidase; KEGG: bha:BH1874 1.0e-144 xsa; alpha-L-arabinosidase; K01209 alpha-N-arabinofuranosidase; Psort location: Cytoplasmic, score: 9.97.
     
 0.486
EHO54197.1
Glycosyl hydrolase family 2, TIM barrel domain protein; KEGG: lbr:LVIS_0138 1.1e-216 beta-D-glucuronidase; K01195 beta-glucuronidase; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.451
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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