STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO52623.1Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: lbr:LVIS_1826 5.4e-82 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 9.97; Belongs to the peptidase S11 family. (308 aa)    
Predicted Functional Partners:
EHO51090.1
Penicillin-binding protein, 1A family; KEGG: lbr:LVIS_0851 6.2e-239 membrane carboxypeptidase (penicillin-binding protein); K05366 penicillin-binding protein 1A.
  
 
 0.884
EHO52521.1
KEGG: lpj:JDM1_2551 4.3e-73 dacA1; serine-type D-Ala-D-Ala carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 9.97; Belongs to the peptidase S11 family.
 
  
 
0.883
EHO45866.1
Penicillin-binding protein, 1A family; KEGG: lbr:LVIS_1489 1.1e-250 membrane carboxypeptidase (penicillin-binding protein); K12555 penicillin-binding protein 2A; Psort location: CytoplasmicMembrane, score: 9.82.
   
 
 0.864
EHO48841.1
KEGG: lbr:LVIS_0732 9.2e-71 N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase.
   
 
 0.650
EHO51147.1
Putative serine/threonine-protein kinase PrkC; KEGG: lbr:LVIS_0962 7.3e-165 serine/threonine kinase protein; K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.584
EHO51184.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: efa:EF2857 1.9e-125 penicillin-binding protein 2B; K00687 penicillin-binding protein 2B.
 
 
 0.521
EHO54073.1
S-layer domain protein.
  
     0.505
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
    0.478
EHO48114.1
Beta-lactamase; KEGG: lsg:lse_1902 4.1e-45 peptidase, putative.
     
 0.449
EHO49714.1
Hypothetical protein.
  
     0.443
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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