STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO52203.1Hypothetical protein; Overlaps another CDS with the same product name. (138 aa)    
Predicted Functional Partners:
EHO52201.1
Hypothetical protein.
   
   0.938
EHO52200.1
Hypothetical protein.
       0.803
EHO52202.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.803
EHO52204.1
Hypothetical protein; Overlaps another CDS with the same product name.
       0.803
EHO52205.1
Hypothetical protein; KEGG: lca:LSEI_2573 0.00098 DNA-directed RNA polymerase subunit delta; K03048 DNA-directed RNA polymerase subunit delta.
       0.803
EHO52206.1
LysM domain protein; KEGG: lsg:lse_2596 3.1e-06 acmA; N-acetylmuramoyl-L-alanine amidase, family 4.
       0.786
EHO52199.1
Hypothetical protein.
       0.773
EHO52207.1
Phage tail tape measure protein, TP901 family; KEGG: bsu:BSU21350 2.3e-08 yomI; SPbeta phage protein; lytic transglycosylase.
       0.768
EHO52314.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
       0.767
EHO52224.1
Terminase small subunit; Psort location: Cytoplasmic, score: 8.96.
  
    0.697
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.