STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO52249.1Toxin-antitoxin system, toxin component, Bro family. (247 aa)    
Predicted Functional Partners:
EHO52244.1
Erf family protein.
 
    0.752
EHO52250.1
Hypothetical protein.
       0.727
EHO52251.1
DNA-binding helix-turn-helix protein; KEGG: eba:ebA5278 0.00094 bzdR; anaerobic benzoate catabolism transcriptional regulator K00891.
       0.727
EHO52237.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.716
EHO52201.1
Hypothetical protein.
  
     0.585
EHO50669.1
KEGG: lsl:LSL_0284 2.7e-48 clpP; ATP-dependent Clp protease proteolytic subunit K01358; Belongs to the peptidase S14 family.
  
    0.573
EHO50663.1
Phage major tail protein.
  
     0.554
EHO50666.1
Putative phage head-tail adaptor.
  
     0.542
EHO50670.1
Phage portal protein, HK97 family; Psort location: Extracellular, score: 9.64.
  
    0.538
EHO52222.1
Phage portal protein, SPP1 family; KEGG: nth:Nther_1816 0.0089 phenylalanyl-tRNA synthetase, beta subunit K01890.
  
     0.531
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.