STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO51664.1Putative oligopeptide transport system permease protein OppB; KEGG: csc:Csac_1028 3.9e-63 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00. (309 aa)    
Predicted Functional Partners:
EHO51665.1
Dipeptide transport system permease protein DppC family protein; KEGG: bov:BOV_A0752 1.1e-37 nikC; nickel transporter permease NikC K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
EHO51666.1
KEGG: llk:LLKF_0402 4.6e-124 optD; oligopeptide ABC transporter ATP-binding protein K02031; Psort location: CytoplasmicMembrane, score: 9.99.
 0.999
EHO51667.1
KEGG: llk:LLKF_0403 3.3e-98 optF; oligopeptide ABC transporter ATP-binding protein K02032; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.999
EHO51663.1
ABC transporter, substrate-binding protein, family 5; KEGG: esi:Exig_2061 1.0e-94 4-phytase K02035; Psort location: Periplasmic, score: 9.86.
 
 0.970
EHO51662.1
ABC transporter, substrate-binding protein, family 5; KEGG: esi:Exig_2061 3.7e-99 4-phytase K02035; Psort location: Periplasmic, score: 9.76.
 
 0.949
EHO50044.1
ABC transporter, substrate-binding protein, family 5; KEGG: sah:SaurJH1_1008 5.4e-82 4-phytase K02035; Psort location: Periplasmic, score: 9.44.
 
 0.945
EHO52106.1
ABC transporter, substrate-binding protein, family 5; KEGG: bcy:Bcer98_1436 2.8e-101 4-phytase; Psort location: Periplasmic, score: 10.00.
 
 0.942
EHO45885.1
ABC transporter, substrate-binding protein, family 5; KEGG: esi:Exig_2061 7.9e-97 4-phytase K02035; Psort location: Periplasmic, score: 10.00.
 
 0.942
EHO49777.1
ABC transporter, substrate-binding protein, family 5; KEGG: esi:Exig_0500 4.8e-97 4-phytase K02035; Psort location: Periplasmic, score: 9.44.
 
 0.941
EHO53155.1
ABC transporter, substrate-binding protein, family 5; KEGG: sah:SaurJH1_1008 8.3e-70 4-phytase K02035; Psort location: Periplasmic, score: 9.76.
 
 0.938
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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