STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO51507.1MFS transporter, SP family; KEGG: lre:Lreu_0479 1.2e-180 sugar transporter; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (462 aa)    
Predicted Functional Partners:
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.560
EHO50438.1
Carbohydrate kinase, FGGY family protein; KEGG: lbr:LVIS_1742 8.1e-198 L-ribulokinase (putative); K00853 L-ribulokinase.
 
  
 0.501
EHO47591.1
Homocysteine S-methyltransferase; KEGG: ckr:CKR_0880 4.1e-46 hypothetical protein; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 9.26.
   
 
  0.449
EHO53062.1
Arabinose metabolism transcriptional repressor family protein; KEGG: dfe:Dfer_2601 2.2e-12 transcriptional regulator, LacI family K02529; Psort location: Cytoplasmic, score: 8.96.
  
     0.430
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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