STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO51539.1Hypothetical protein; KEGG: pmx:PERMA_0381 2.5e-05 uppP; undecaprenyl-diphosphatase UppP K06153; Psort location: CytoplasmicMembrane, score: 10.00. (244 aa)    
Predicted Functional Partners:
EHO51540.1
Hypothetical protein; KEGG: dev:DhcVS_316 0.0029 cdsA; phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.736
EHO52326.1
Hypothetical protein; KEGG: ttr:Tter_0703 0.0051 2-alkenal reductase.
    
   0.480
EHO52327.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
    
   0.480
EHO52328.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
    
   0.480
EHO50483.1
KEGG: lbr:LVIS_0034 1.3e-133 trypsin-like serine protease; K01362; Psort location: Periplasmic, score: 9.44.
    
   0.480
EHO51541.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.455
EHO52858.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.437
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.