STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO51089.1DnaD domain protein; Psort location: Cytoplasmic, score: 8.96. (238 aa)    
Predicted Functional Partners:
EHO51086.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
 
     0.886
dinG
DnaQ family exonuclease/DinG family helicase; 3'-5' exonuclease.
 
  
 0.845
EHO50937.1
Primosomal protein DnaI; KEGG: mga:MGA_0404 0.0024 ruvB; Holliday junction DNA helicase RuvB K03551; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.833
asnS
asparagine--tRNA ligase; KEGG: lpl:lp_1740 1.4e-195 asnC; asparaginyl-tRNA synthetase K01893; Psort location: Cytoplasmic, score: 10.00.
  
    0.808
EHO51184.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: efa:EF2857 1.9e-125 penicillin-binding protein 2B; K00687 penicillin-binding protein 2B.
  
    0.689
EHO51087.1
KEGG: lpl:lp_1739 1.4e-108 aspB; aspartate aminotransferase; Psort location: Cytoplasmic, score: 9.26.
       0.674
EHO50938.1
Replication initiation and membrane attachment protein, DnaB/DnaD family; KEGG: bpu:BPUM_2543 1.7e-30 dnaB; replicative DNA helicase K03346.
  
   
 0.672
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
    0.649
EHO51057.1
Tetratricopeptide repeat protein; KEGG: ath:AT3G04240 1.6e-08 SEC; SEC (secret agent); transferase, transferring glycosyl groups; K09667 polypeptide N-acetylglucosaminyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
     0.633
EHO52339.1
Hypothetical protein; Involved in cell division and chromosome segregation.
  
    0.620
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.