STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO50925.1Methyltransferase domain protein; KEGG: lpl:lp_1533 5.9e-60 methyltransferase (putative) K00599. (251 aa)    
Predicted Functional Partners:
tmcAL
Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.
  
    0.964
EHO50927.1
Hydrolase, HD family; KEGG: mcp:MCAP_0529 3.6e-18 nadD; putative nicotinate-nucleotide adenylyltransferase K00969; Psort location: Cytoplasmic, score: 8.96.
  
    0.885
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
 
    0.884
EHO50930.1
RNA-binding protein, YhbY family.
 
    0.862
EHO50928.1
Hypothetical protein; KEGG: lpj:JDM1_1283 1.1e-14 nadD; nicotinic acid mononucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase.
  
    0.836
EHO50931.1
Ribosome biogenesis GTPase YqeH; KEGG: lre:Lreu_1237 2.0e-137 GTP-binding protein YqeH K06948; Psort location: Cytoplasmic, score: 8.96.
  
    0.788
EHO50932.1
HAD phosphatase, family IIIA; KEGG: spd:SPD_1560 7.0e-34 hypothetical protein K07015.
       0.785
EHO50929.1
Putative nicotinate-nucleotide adenylyltransferase; KEGG: lbr:LVIS_1029 3.0e-42 nadD; nicotinic acid mononucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase; Psort location: Cytoplasmic, score: 9.26; Belongs to the NadD family.
  
    0.765
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
   
 0.753
EHO47591.1
Homocysteine S-methyltransferase; KEGG: ckr:CKR_0880 4.1e-46 hypothetical protein; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 9.26.
    
 0.719
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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