STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO50672.1Putative phage terminase, large subunit; Psort location: Cytoplasmic, score: 8.96. (610 aa)    
Predicted Functional Partners:
EHO50673.1
Phage terminase, small subunit, P27 family.
 
    0.953
EHO50669.1
KEGG: lsl:LSL_0284 2.7e-48 clpP; ATP-dependent Clp protease proteolytic subunit K01358; Belongs to the peptidase S14 family.
 
     0.931
EHO50670.1
Phage portal protein, HK97 family; Psort location: Extracellular, score: 9.64.
 
   
 0.931
EHO50668.1
Phage major capsid protein, HK97 family; KEGG: bao:BAMF_3086 3.0e-15 seryl-tRNA synthetase seryl-tRNA(Ser/sec) synthetase; serine-tRNA ligase; SerRS.
 
     0.928
EHO50665.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.900
EHO50663.1
Phage major tail protein.
 
     0.899
EHO50664.1
Hypothetical protein.
 
     0.899
EHO50674.1
Hypothetical protein.
 
  
 0.874
EHO50666.1
Putative phage head-tail adaptor.
 
     0.858
EHO50660.1
Phage tail tape measure protein, TP901 family; KEGG: edi:EDI_341030 2.0e-10 intracellular protein transport protein USO1; Psort location: OuterMembrane, score: 9.49.
 
     0.832
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.