STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO50483.1KEGG: lbr:LVIS_0034 1.3e-133 trypsin-like serine protease; K01362; Psort location: Periplasmic, score: 9.44. (417 aa)    
Predicted Functional Partners:
EHO53815.1
KEGG: rru:Rru_A0525 9.9e-35 two component transcriptional regulator / cell cycle transcriptional regulator CtrA K13584; Psort location: Cytoplasmic, score: 9.97.
   
  
 0.934
EHO50484.1
Metallo-beta-lactamase domain protein; KEGG: snc:HMPREF0837_11277 3.7e-83 phnP; beta-lactamase superfamily I metal-dependent hydrolase; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.791
EHO50485.1
YycH protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 0.773
clpP
Endopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
  
 0.752
EHO50487.1
Putative sensor protein kinase WalK; KEGG: lbr:LVIS_0030 2.6e-247 signal transduction histidine kinase; K07652 two-component system, OmpR family, sensor histidine kinase VicK; Psort location: CytoplasmicMembrane, score: 10.00.
    0.746
EHO50486.1
YycH protein; KEGG: pfa:PFB0730w 0.00026 DEAD/DEAH box helicase, putative; K11647 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4; Psort location: OuterMembrane, score: 9.49.
  
  
 0.708
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
    
 0.660
glpK-2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
    
 0.660
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.639
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
  
 
   0.630
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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