STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO50486.1YycH protein; KEGG: pfa:PFB0730w 0.00026 DEAD/DEAH box helicase, putative; K11647 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4; Psort location: OuterMembrane, score: 9.49. (432 aa)    
Predicted Functional Partners:
EHO50485.1
YycH protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.983
EHO50487.1
Putative sensor protein kinase WalK; KEGG: lbr:LVIS_0030 2.6e-247 signal transduction histidine kinase; K07652 two-component system, OmpR family, sensor histidine kinase VicK; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.915
EHO50484.1
Metallo-beta-lactamase domain protein; KEGG: snc:HMPREF0837_11277 3.7e-83 phnP; beta-lactamase superfamily I metal-dependent hydrolase; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.895
EHO54097.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.719
EHO50483.1
KEGG: lbr:LVIS_0034 1.3e-133 trypsin-like serine protease; K01362; Psort location: Periplasmic, score: 9.44.
  
  
 0.708
EHO50865.1
MucBP domain protein.
  
     0.703
EHO50488.1
Transcriptional regulatory protein WalR; KEGG: bde:BDP_0386 7.7e-51 vicR; response regulator protein VicR K07776; Psort location: Cytoplasmic, score: 9.97.
  
    0.673
EHO50938.1
Replication initiation and membrane attachment protein, DnaB/DnaD family; KEGG: bpu:BPUM_2543 1.7e-30 dnaB; replicative DNA helicase K03346.
  
     0.670
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
   
 0.669
EHO52861.1
Hypothetical protein; KEGG: xtr:733528 0.0061 mbd4, med1; methyl-CpG binding domain protein 4; K10801 methyl-CpG-binding domain protein 4; Psort location: OuterMembrane, score: 9.52.
  
     0.666
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.