STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO50323.1EDD domain protein, DegV family; KEGG: mga:MGA_1184 3.8e-17 DegV-like protein. (289 aa)    
Predicted Functional Partners:
EHO51141.1
KEGG: lwe:lwe1833 6.0e-138 DAK2 domain-containing protein K07030.
   0.993
EHO50322.1
Hypothetical protein.
 
     0.732
EHO50029.1
Hypothetical protein; KEGG: bcz:BCZK3615 1.5e-06 dhaK; dihydroxyacetone-related kinase K07030.
 
   0.726
EHO51142.1
Hypothetical protein.
 
    0.526
EHO50324.1
Hypothetical protein.
       0.486
EHO50325.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: xbo:XBJ1_0407 1.3e-39 putative oxidoreductase, NAD(P)-binding domain; Psort location: Cytoplasmic, score: 9.26; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.469
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.