STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO49972.1Hypothetical protein; KEGG: bmd:BMD_3822 1.3e-07 polysaccharide deacetylase. (119 aa)    
Predicted Functional Partners:
EHO49971.1
Hypothetical protein; KEGG: bmd:BMD_3822 1.6e-09 polysaccharide deacetylase; overlaps another CDS with the same product name.
     0.994
EHO49969.1
Putative poly-beta-1,6 N-acetyl-D-glucosamine synthase; KEGG: ppr:PBPRB0456 1.2e-68 N-glycosyltransferase; K11936 biofilm PGA synthesis N-glycosyltransferase PgaC; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.993
EHO49968.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: asu:Asuc_0859 5.9e-53 glycoside hydrolase family protein; K12373 beta-hexosaminidase.
 
   
 0.945
EHO49970.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82; overlaps another CDS with the same product name.
       0.773
EHO49973.1
Hypothetical protein.
       0.773
EHO50831.1
Glycosyltransferase, group 2 family protein; KEGG: lsl:LSL_1019 1.3e-149 N-acetylglucosaminyltransferase K00754; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.767
EHO49974.1
Hypothetical protein.
       0.718
EHO49485.1
Hypothetical protein; KEGG: lbr:LVIS_1825 1.5e-15 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6).
  
     0.713
EHO51506.1
6-phospho-beta-glucosidase; KEGG: efa:EF0291 8.5e-171 celA; 6-phospho-beta-glucosidase K01223; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycosyl hydrolase 1 family.
     
 0.500
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
    
  0.463
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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