STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO49892.1KEGG: spp:SPP_0509 1.2e-52 putative ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 10.00. (550 aa)    
Predicted Functional Partners:
EHO49891.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
    0.995
EHO49893.1
Cobalt transport protein; KEGG: ljf:FI9785_387 7.1e-10 ABC-type cobalt transport system, permease component, CbiQ related K02008; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.994
ecfT
Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.970
EHO49890.1
Hypothetical protein.
 
     0.926
EHO48218.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.906
EHO51666.1
KEGG: llk:LLKF_0402 4.6e-124 optD; oligopeptide ABC transporter ATP-binding protein K02031; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
0.880
EHO50009.1
Hypothetical protein; KEGG: llk:LLKF_2101 3.9e-05 acmB; N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.64.
 
     0.870
EHO47980.1
KEGG: rcp:RCAP_rcc02035 0.00053 cbiQ2; cobalt ABC transporter permease CbiQ K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.815
EHO51665.1
Dipeptide transport system permease protein DppC family protein; KEGG: bov:BOV_A0752 1.1e-37 nikC; nickel transporter permease NikC K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.796
EHO51425.1
Hypothetical protein; KEGG: mru:mru_1319 8.8e-06 DEAD/DEAH box helicase domain-containing protein; K03725 archaea-specific helicase; Psort location: Extracellular, score: 9.64.
 
     0.794
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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